Gene: Sopen12g013310

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g013310
  • Transcript Identifier Sopen12g013310.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 27890938-27918709 : negative

Gene Family Information

  • ID HOM05D000084
  • #Genes/#Species 3652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g013310.1

Descriptions

  • Description significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. | cyclin-dependent kinase E, 1 (CDKE, 1) | FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Protein kinase, catalytic domain , Serine/threonine-protein kinase domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site | BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63610
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT5G63610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G63610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
13.1.1.2.5 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.catalytic component CDKE
15.3.4.4.4.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.regulatory kinase module.component CDK8
18.4.3.1.5 Protein modification.phosphorylation.CMGC protein kinase superfamily.CDK protein kinase families.protein kinase (CDKE/CDK8)