Gene: Sopen12g004880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g004880
  • Transcript Identifier Sopen12g004880.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 3428054-3434760 : positive

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g004880.1

Descriptions

  • Description member of Cyclic nucleotide gated channel family | cyclic nucleotide gated channel 5 (CNGC5) | FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, potassium channel activity | INVOLVED IN: ion transport, transmembrane transport | LOCATED IN: membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Ion transport , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold , IQ calmodulin-binding region | BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
InterProion transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006813
IEA
InterPropotassium ion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
InterProion channel activity
GO:0005249
IEA
InterProvoltage-gated potassium channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000595 Cyclic nucleotide-binding domain
IPR005821 Ion transport domain
IPR014710 RmlC-like jelly roll fold
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR018490 Cyclic nucleotide-binding-like
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)