Gene: Sopen12g004420

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g004420
  • Transcript Identifier Sopen12g004420.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 2967138-2971646 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g004420.1

Descriptions

  • Description Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 2 (QRT2) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: in 6 processes | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase