Gene: Sopen12g003480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g003480
  • Transcript Identifier Sopen12g003480.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 2152188-2157671 : negative

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g003480.1

Descriptions

  • Description Pectin lyase-like superfamily protein | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: cell wall modification | LOCATED IN: cell wall, plant-type cell wall, cytoplasm | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Pectinesterase, active site , Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
InterPropectinesterase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G19730
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G19730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR000070 Pectinesterase, catalytic
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase