Gene: Sopen12g002260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g002260
  • Transcript Identifier Sopen12g002260.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 920929-924768 : negative

Gene Family Information

  • ID HOM05D001610
  • #Genes/#Species 400/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g002260.1

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G08560
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G08560
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT5G08560
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G08560
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT5G08560
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT5G08560
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G08560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G08560
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G08560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR006595 CTLH, C-terminal LisH motif
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
19.2.1.3.1.7 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID7