Gene: Sopen11g027890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g027890
  • Transcript Identifier Sopen11g027890.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 63499255-63503152 : negative

Gene Family Information

  • ID HOM05D003096
  • #Genes/#Species 222/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g027890.1

Descriptions

  • Description 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds | 20S proteasome beta subunit G1 (PBG1) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site , Proteasome endopeptidase complex, beta subunit , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G56450
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G56450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G56450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005839
IEA
InterProproteasome core complex
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G56450
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G56450
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G56450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016295 Proteasome subunit beta 4
IPR001353 Proteasome, subunit alpha/beta
IPR029055 Nucleophile aminohydrolases, N-terminal
Mapman id Description
19.2.5.1.2.7 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-7