Gene: Sopen11g026140

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g026140
  • Transcript Identifier Sopen11g026140.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61883810-61889740 : positive

Gene Family Information

  • ID HOM05D001405
  • #Genes/#Species 446/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g026140.1

Descriptions

  • Description Superoxide dismutase (Cu-Zn), chloroplast precursor (EC 1.15.1.1) - Petunia hybrida (Petunia), Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. | copper/zinc superoxide dismutase 2 (CSD2) | FUNCTIONS IN: superoxide dismutase activity | INVOLVED IN: in 6 processes | LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site , Superoxide dismutase, copper/zinc binding | BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071493
ISO
PLAZA Integrative Orthologycellular response to UV-B AT2G28190
GO:0071329
ISO
PLAZA Integrative Orthologycellular response to sucrose stimulus AT2G28190
GO:0034599
ISO
PLAZA Integrative Orthologycellular response to oxidative stress AT2G28190
GO:0071457
ISO
PLAZA Integrative Orthologycellular response to ozone AT2G28190
GO:0010039
ISO
PLAZA Integrative Orthologyresponse to iron ion AT2G28190
GO:0071484
ISO
PLAZA Integrative Orthologycellular response to light intensity AT2G28190
GO:0019430
ISO
PLAZA Integrative Orthologyremoval of superoxide radicals AT2G28190
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT2G28190
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT2G28190
GO:0006801
IEA
InterProsuperoxide metabolic process
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT2G28190
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species Zm00001eb039000
GO:0009410
ISO
PLAZA Integrative Orthologyresponse to xenobiotic stimulus Zm00001eb039000
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide Zm00001eb039000
GO:0046688
ISO
PLAZA Integrative Orthologyresponse to copper ion AT2G28190
GO:0035195
ISO
PLAZA Integrative Orthologygene silencing by miRNA AT2G28190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004784
ISO
PLAZA Integrative Orthologysuperoxide dismutase activity AT2G28190
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G28190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001424 Superoxide dismutase, copper/zinc binding domain
IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily
IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
Mapman id Description
10.2.1.3 Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.copper/zinc superoxide dismutase (CSD)