Gene: Sopen11g025790

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025790
  • Transcript Identifier Sopen11g025790.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61432005-61433155 : negative

Gene Family Information

  • ID HOM05D000110
  • #Genes/#Species 3051/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025790.1

Descriptions

  • Description Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. | OBF-binding protein 3 (OBP3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: DNA binding with one finger 2.4 ., Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize), Zinc finger, Dof-type
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT3G55370
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G55370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G55370
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G55370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G55370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR003851 Zinc finger, Dof-type
Mapman id Description
15.5.1.5 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF)