Gene: Sopen11g010050
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g010050
- Transcript Identifier Sopen11g010050.1
- Gene Type Coding gene
- Location Spenn-ch11 : 10665544-10678383 : negative
Gene Family Information
- ID HOM05D002398
- #Genes/#Species 283/96
- Phylogenetic origin
- ID ORTHO05D002817
- #Genes/#Species 260/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g010050.1
Descriptions
- Description Protease-associated (PA) RING/U-box zinc finger family protein | FUNCTIONS IN: peptidase activity, zinc ion binding | LOCATED IN: endomembrane system | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protease-associated PA , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT5G66160 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G66160 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G66160 |
GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT5G66160 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G66160 |
GO:0000306 | ISO | PLAZA Integrative Orthology | extrinsic component of vacuolar membrane | AT5G66160 |
GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G66160 |
GO:0000139 | ISO | PLAZA Integrative Orthology | Golgi membrane | AT1G71980 |
GO:0000326 | ISO | PLAZA Integrative Orthology | protein storage vacuole | AT1G71980 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
22.3.3.2 | Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.storage vacuole sorting receptor (RMR) |