Gene: Sopen11g006900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006900
  • Transcript Identifier Sopen11g006900.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 5087990-5089382 : positive

Gene Family Information

  • ID HOM05D002016
  • #Genes/#Species 328/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006900.1

Descriptions

  • Description 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant), Ribosomal protein L6 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, plasma membrane, membrane | EXPRESSED IN: leaf | CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal , Ribosomal protein L6E | BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G18540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G18540
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G18540
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G18540
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G18540
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT1G18540
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G74060
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G18540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005568 Ribosomal protein L6, N-terminal
IPR041997 Ribosomal Protein L6, KOW domain
IPR008991 Translation protein SH3-like domain superfamily
IPR000915 60S ribosomal protein L6E
IPR014722 Ribosomal protein L2, domain 2
Mapman id Description
17.1.2.1.4 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL6