Gene: Sopen11g006750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g006750
  • Transcript Identifier Sopen11g006750.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 4909551-4914985 : negative

Gene Family Information

  • ID HOM05D001485
  • #Genes/#Species 428/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g006750.1

Descriptions

  • Description Isocitrate dehydrogenase (NADP) (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP( )-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco), NADP-specific isocitrate dehydrogenase (ICDH) | isocitrate dehydrogenase (ICDH) | FUNCTIONS IN: NAD or NADH binding, isocitrate dehydrogenase (NADP ) activity, magnesium ion binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | INVOLVED IN: oxidation reduction, isocitrate metabolic process, metabolic process | LOCATED IN: peroxisome, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase , Isocitrate dehydrogenase NADP-dependent, eukaryotic , Isocitrate/isopropylmalate dehydrogenase, conserved site | BEST Arabidopsis thaliana protein match is: cytosolic NADP -dependent isocitrate dehydrogenase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006102
IEA
InterProisocitrate metabolic process
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT1G65930
GO:0006739
ISO
PLAZA Integrative OrthologyNADP metabolic process AT1G65930
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G65930
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G65930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0004450
IEA
InterProisocitrate dehydrogenase (NADP+) activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G65930
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G54340
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G65930
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G65930
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G65930
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G65930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004790 Isocitrate dehydrogenase NADP-dependent
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor