Gene: Sopen11g001720
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g001720
- Transcript Identifier Sopen11g001720.1
- Gene Type Coding gene
- Location Spenn-ch11 : 632921-637054 : negative
Gene Family Information
- ID HOM05D000987
- #Genes/#Species 610/96
- Phylogenetic origin
- ID ORTHO05D000831
- #Genes/#Species 590/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g001720.1
Descriptions
- Description Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. | plant glycogenin-like starch initiation protein 1 (PGSIP1) | FUNCTIONS IN: transferase activity, transferring glycosyl groups | INVOLVED IN: biosynthetic process, starch metabolic process | LOCATED IN: chloroplast | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 | BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 ., Glycosyl transferase, family 8
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT3G18660 |
| GO:0010417 | ISO | PLAZA Integrative Orthology | glucuronoxylan biosynthetic process | AT3G18660 |
| GO:0005982 | ISO | PLAZA Integrative Orthology | starch metabolic process | AT3G18660 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT3G18660 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0015020 | ISO | PLAZA Integrative Orthology | glucuronosyltransferase activity | AT3G18660 |
| GO:0080116 | ISO | PLAZA Integrative Orthology | glucuronoxylan glucuronosyltransferase activity | AT3G18660 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G18660 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.2.1 | Cell wall organisation.hemicellulose.xylan.biosynthesis.glucuronosyltransferase activities.glucuronosyltransferase (GUX) |