Gene: Sopen10g031870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g031870
  • Transcript Identifier Sopen10g031870.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 79341092-79342691 : positive

Gene Family Information

  • ID HOM05D000854
  • #Genes/#Species 698/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g031870.1

Descriptions

  • Description small nuclear ribonucleoprotein F (RUXF) | FUNCTIONS IN: molecular_function unknown | LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Small nuclear ribonucleoprotein SmF , Like-Sm ribonucleoprotein (LSM) domain , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain | BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034100 Small nuclear ribonucleoprotein F
IPR016487 Sm-like protein Lsm6/SmF
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
35.1 not assigned.annotated