Gene: Sopen10g030480
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g030480
- Transcript Identifier Sopen10g030480.1
- Gene Type Coding gene
- Location Spenn-ch10 : 78139894-78141975 : positive
Gene Family Information
- ID HOM05D000597
- #Genes/#Species 940/95
- Phylogenetic origin
- ID ORTHO05D000603
- #Genes/#Species 748/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g030480.1
Descriptions
- Description It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. | cytokinin oxidase/dehydrogenase 1 (CKX1) | FUNCTIONS IN: cytokinin dehydrogenase activity | INVOLVED IN: N-terminal protein myristoylation, cytokinin catabolic process, meristem development | LOCATED IN: vacuole | EXPRESSED IN: lateral root, shoot apex, hypocotyl, root, flower | CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain , FAD-binding, type 2 , Oxygen oxidoreductase covalent FAD-binding site , FAD-linked oxidase-like, C-terminal , FAD linked oxidase, N-terminal | BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009690 | IEA | InterPro | cytokinin metabolic process | |
GO:0009823 | ISO | PLAZA Integrative Orthology | cytokinin catabolic process | AT2G41510 |
GO:0048507 | ISO | PLAZA Integrative Orthology | meristem development | AT2G41510 |
GO:0010103 | ISO | PLAZA Integrative Orthology | stomatal complex morphogenesis | AT3G63440 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0019139 | IEA | InterPro | cytokinin dehydrogenase activity | |
GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0016491 | IEA | InterPro | oxidoreductase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G41510 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR015345 | Cytokinin dehydrogenase 1, FAD/cytokinin binding domain |
IPR016169 | FAD-binding, type PCMH, subdomain 2 |
IPR016167 | FAD-binding, type PCMH, subdomain 1 |
IPR016164 | FAD-linked oxidase-like, C-terminal |
IPR036318 | FAD-binding, type PCMH-like superfamily |
IPR006094 | FAD linked oxidase, N-terminal |
IPR016170 | Cytokinin dehydrogenase, C-terminal domain superfamily |
Mapman id | Description |
---|---|
11.4.3.2 | Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase |