Gene: Sopen10g027230

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g027230
  • Transcript Identifier Sopen10g027230.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 74908049-74908648 : positive

Gene Family Information

  • ID HOM05D000135
  • #Genes/#Species 2640/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g027230.1

Descriptions

  • Description Calcium-binding protein CAST - Solanum tuberosum (Potato), Calcium sensor involved in trichome branching. | calmodulin like 42 (CML42) | FUNCTIONS IN: calcium ion binding | INVOLVED IN: trichome branching | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: calmodulin like 43
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051592
ISO
PLAZA Integrative Orthologyresponse to calcium ion AT5G44460
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G44460
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT4G20780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G20780
GO:0061891
ISO
PLAZA Integrative Orthologycalcium ion sensor activity AT5G44460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44460
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G44460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011992 EF-hand domain pair
IPR002048 EF-hand domain
Mapman id Description
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)