Gene: Sopen10g020770

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g020770
  • Transcript Identifier Sopen10g020770.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 57513947-57515736 : negative

Gene Family Information

  • ID HOM05D001118
  • #Genes/#Species 550/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g020770.1

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT2G14760
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G33880
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT4G33880
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G33880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G14760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os11g0634700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)