Gene: Sopen10g005050

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g005050
  • Transcript Identifier Sopen10g005050.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 3428902-3431158 : positive

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g005050.1

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT4G00870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G00870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G00870
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G00870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR045084 Transcription factor AIB/MYC-like
IPR025610 Transcription factor MYC/MYB N-terminal
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)