Gene: Sopen10g004240
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g004240
- Transcript Identifier Sopen10g004240.1
- Gene Type Coding gene
- Location Spenn-ch10 : 2682138-2682698 : positive
Gene Family Information
- ID HOM05D000463
- #Genes/#Species 1137/99
- Phylogenetic origin
- ID ORTHO05D001294
- #Genes/#Species 438/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g004240.1
Descriptions
- Description RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. | RING membrane-anchor 1 (RMA1) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | InterPro | endoplasmic reticulum |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase |