Gene: Sopen10g003810
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g003810
- Transcript Identifier Sopen10g003810.1
- Gene Type Coding gene
- Location Spenn-ch10 : 2253851-2256265 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g003810.1
Descriptions
- Description pentatricopeptide (PPR) repeat-containing protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT4G18750 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT4G18750 |
| GO:0010588 | ISO | PLAZA Integrative Orthology | cotyledon vascular tissue pattern formation | AT4G18750 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT4G18750 |
| GO:1900865 | ISO | PLAZA Integrative Orthology | chloroplast RNA modification | AT4G18750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G18750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |