Gene: Sopen10g001320
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g001320
- Transcript Identifier Sopen10g001320.1
- Gene Type Coding gene
- Location Spenn-ch10 : 301937-306854 : negative
Gene Family Information
- ID HOM05D000226
- #Genes/#Species 1818/96
- Phylogenetic origin
- ID ORTHO05D000142
- #Genes/#Species 1720/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g001320.1
Descriptions
- Description Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the genes spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. | MERISTEM LAYER 1 (ATML1) | FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: epidermal cell differentiation, regulation of transcription, DNA-dependent, cotyledon development | LOCATED IN: nucleus | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox, conserved site , Homeobox , Homeodomain-like , Lipid-binding START , Homeodomain-related | BEST Arabidopsis thaliana protein match is: protodermal factor 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0008289 | IEA | InterPro | lipid binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.3.3 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV) |