Gene: Sopen09g035340
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g035340
- Transcript Identifier Sopen09g035340.1
- Gene Type Coding gene
- Location Spenn-ch09 : 83225711-83227402 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D009689
- #Genes/#Species 94/81
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g035340.1
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: membrane | EXPRESSED IN: leaf | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016554 | ISO | PLAZA Integrative Orthology | cytidine to uridine editing | AT4G14050 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.4.25 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF35) |