Gene: Sopen09g029510

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g029510
  • Transcript Identifier Sopen09g029510.2
  • Gene Type Coding gene
  • Location Spenn-ch09 : 77871480-77875538 : positive

Gene Family Information

  • ID HOM05D000091
  • #Genes/#Species 3486/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g029510.2

Descriptions

  • Description Phototropic-responsive NPH3 family protein | FUNCTIONS IN: signal transducer activity | INVOLVED IN: response to light stimulus, pollen tube growth | EXPRESSED IN: leaf apex, inflorescence meristem, cauline leaf, root, flower | EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ fold , BTB/POZ-like | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G03010
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT2G47860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000091

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027356 NPH3 domain
IPR011333 SKP1/BTB/POZ domain superfamily
IPR043454 NPH3/RPT2-like family
Mapman id Description
19.2.2.8.2.2.11 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (SETH6)