Gene: Sopen09g005780

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g005780
  • Transcript Identifier Sopen09g005780.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 4571958-4574090 : positive

Gene Family Information

  • ID HOM05D000080
  • #Genes/#Species 3730/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g005780.1

Descriptions

  • Description putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | laccase 17 (LAC17) | FUNCTIONS IN: laccase activity | INVOLVED IN: oxidation reduction, lignin catabolic process | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046274
IEA
InterProlignin catabolic process
GO:0009809
ISO
PLAZA Integrative Orthologylignin biosynthetic process AT5G60020
GO:0009698
ISO
PLAZA Integrative Orthologyphenylpropanoid metabolic process AT5G60020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
InterProcopper ion binding
GO:0052716
IEA
InterProhydroquinone:oxygen oxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
InterProapoplast
GO:0048226
ISO
PLAZA Integrative OrthologyCasparian strip AT1G18140
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G60020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034288 Laccase, first cupredoxin domain
IPR017761 Laccase
IPR011707 Multicopper oxidase, N-termianl
IPR045087 Multicopper oxidase
IPR034289 Laccase, third cupredoxin domain
IPR034285 Laccase, second cupredoxin domain
IPR008972 Cupredoxin
IPR011706 Multicopper oxidase, C-terminal
IPR001117 Multicopper oxidase, type 1
Mapman id Description
21.6.2.2 Cell wall organisation.lignin.monolignol conjugation and polymerization.lignin laccase