Gene: Sopen08g025580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g025580
  • Transcript Identifier Sopen08g025580.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 65364124-65364822 : negative

Gene Family Information

  • ID HOM05D000523
  • #Genes/#Species 1041/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g025580.1

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: zinc-finger protein 10
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902890
ISO
PLAZA Integrative Orthologyregulation of root hair elongation AT4G17810
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G37740
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT4G17810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000987
ISO
PLAZA Integrative Orthologycis-regulatory region sequence-specific DNA binding AT4G17810
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G17810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G17810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)