Gene: Sopen08g003930
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g003930
- Transcript Identifier Sopen08g003930.1
- Gene Type Coding gene
- Location Spenn-ch08 : 2775603-2778477 : positive
Gene Family Information
- ID HOM05D000241
- #Genes/#Species 1737/97
- Phylogenetic origin
- ID ORTHO05D001001
- #Genes/#Species 523/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g003930.1
Descriptions
- Description a member of the plasma membrane intrinsic protein subfamily PIP1. | TRANSMEMBRANE PROTEIN C (TMP-C) | FUNCTIONS IN: water channel activity | INVOLVED IN: response to water deprivation, transport | LOCATED IN: membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site , Major intrinsic protein | BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0006833 | ISO | PLAZA Integrative Orthology | water transport | AT1G01620 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G01620 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015267 | IEA | InterPro | channel activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G01620 |
| GO:0015250 | ISO | PLAZA Integrative Orthology | water channel activity | AT1G01620 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G01620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.3.1.2 | Solute transport.channels.MIP family.plasma membrane intrinsic protein (PIP) |