Gene: Sopen07g033560

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g033560
  • Transcript Identifier Sopen07g033560.2
  • Gene Type Coding gene
  • Location Spenn-ch07 : 78336401-78339091 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g033560.2

Descriptions

  • Description Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 1 (QRT1) | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: pectin catabolic process | LOCATED IN: endomembrane system, cell wall, plant-type cell wall | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification
GO:0045490
ISO
PLAZA Integrative Orthologypectin catabolic process AT5G55590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
InterPropectinesterase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase