Gene: Sopen07g033560
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g033560
- Transcript Identifier Sopen07g033560.2
- Gene Type Coding gene
- Location Spenn-ch07 : 78336401-78339091 : positive
Gene Family Information
- ID HOM05D000165
- #Genes/#Species 2272/97
- Phylogenetic origin
- ID ORTHO05D000719
- #Genes/#Species 655/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen07g033560.2
Descriptions
- Description Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 1 (QRT1) | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: pectin catabolic process | LOCATED IN: endomembrane system, cell wall, plant-type cell wall | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042545 | IEA | InterPro | cell wall modification | |
| GO:0045490 | ISO | PLAZA Integrative Orthology | pectin catabolic process | AT5G55590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030599 | IEA | InterPro | pectinesterase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.1.2.1 | Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase |