Gene: Sopen07g027770

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g027770
  • Transcript Identifier Sopen07g027770.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 73433879-73440503 : negative

Gene Family Information

  • ID HOM05D002349
  • #Genes/#Species 289/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g027770.1

Descriptions

  • Description Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression. | RING 1A (RING1A) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: negative regulation of gene expression, epigenetic | LOCATED IN: nucleus, PRC1 complex | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | BEST Arabidopsis thaliana protein match is: RING 1B
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G44280
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity AT5G44280
GO:0010077
ISO
PLAZA Integrative Orthologymaintenance of inflorescence meristem identity AT5G44280
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT5G44280
GO:0010076
ISO
PLAZA Integrative Orthologymaintenance of floral meristem identity AT5G44280
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G44280
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G44280
GO:0001709
ISO
PLAZA Integrative Orthologycell fate determination AT5G44280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44280
GO:0035102
ISO
PLAZA Integrative OrthologyPRC1 complex AT5G44280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR044592 Putative E3 ubiquitin-protein ligase RING1a/b
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.3.6.1.2 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.core components.modification writer component RING1