Gene: Sopen07g026030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g026030
  • Transcript Identifier Sopen07g026030.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 71851147-71855489 : positive

Gene Family Information

  • ID HOM05D000109
  • #Genes/#Species 3058/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g026030.1

Descriptions

  • Description member of Putative ligand-gated ion channel subunit family | glutamate receptor 3.4 (GLR3.4) | FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity | INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus | LOCATED IN: integral to membrane, membrane | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 , Ionotropic glutamate receptor , Glutamate receptor-related , GPCR, family 3, gamma-aminobutyric acid receptor, type B , Extracellular ligand-binding receptor , Ionotropic glutamate-like receptor, plant | BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071230
ISO
PLAZA Integrative Orthologycellular response to amino acid stimulus AT1G05200
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT1G05200
GO:0019722
ISO
PLAZA Integrative Orthologycalcium-mediated signaling AT1G05200
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT1G05200
GO:0006816
ISO
PLAZA Integrative Orthologycalcium ion transport AT1G05200
GO:0071311
ISO
PLAZA Integrative Orthologycellular response to acetate AT1G05200
GO:0070584
ISO
PLAZA Integrative Orthologymitochondrion morphogenesis AT2G32390
GO:0071260
ISO
PLAZA Integrative Orthologycellular response to mechanical stimulus AT1G05200
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT2G32390
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G05200
GO:0034220
ISO
PLAZA Integrative Orthologyion transmembrane transport AT1G05200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G05200
GO:0015276
IEA
InterProligand-gated ion channel activity
GO:0005216
ISO
PLAZA Integrative Orthologyion channel activity AT2G32390
GO:0005262
ISO
PLAZA Integrative Orthologycalcium channel activity AT1G05200
GO:0008066
ISO
PLAZA Integrative Orthologyglutamate receptor activity Solyc07g052400.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G32390
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G32390
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G05200
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G05200
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001828 Receptor, ligand binding region
IPR001320 Ionotropic glutamate receptor
IPR028082 Periplasmic binding protein-like I
IPR044440 Plant glutamate receptor, periplasmic ligand-binding domain
IPR001638 Solute-binding protein family 3/N-terminal domain of MltF
IPR017103 Ionotropic glutamate receptor, plant
Mapman id Description
24.3.9 Solute transport.channels.ligand-gated cation channel (GLR)