Gene: Sopen07g025630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g025630
  • Transcript Identifier Sopen07g025630.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 71415939-71417276 : positive

Gene Family Information

  • ID HOM05D000515
  • #Genes/#Species 1048/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g025630.1

Descriptions

  • Description Helicase protein with RING/U-box domain | FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000515
GO:0070615
ISO
PLAZA Homology (enrichment)nucleosome-dependent ATPase activity HOM05D000515

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
Mapman id Description
12.4.8.3.2 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)