Gene: Sopen07g025150
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g025150
- Transcript Identifier Sopen07g025150.1
- Gene Type Coding gene
- Location Spenn-ch07 : 70803437-70804254 : positive
Gene Family Information
- ID HOM05D000413
- #Genes/#Species 1230/100
- Phylogenetic origin
- ID ORTHO05D011129
- #Genes/#Species 38/7
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen07g025150.1
Descriptions
- Description Encodes SPIK, a member of the Shaker family potassium ion (K ) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600) | II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290) | III (weakly inward rectifying channel): AKT2 (AT4G22200) | IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650) | V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutant plants have impaired pollen-tube growth. | Shaker pollen inward K channel (SPIK) | FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, potassium channel activity | INVOLVED IN: pollen tube growth | LOCATED IN: membrane | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Potassium channel, voltage-dependent, EAG/ELK/ERG , Protein of unknown function DUF3354 , Ankyrin repeat-containing domain , Ion transport , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: K transporter 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006813 | ISO | PLAZA Homology (enrichment) | potassium ion transport | HOM05D000413 |
| GO:0006811 | ISO | PLAZA Homology (enrichment) | ion transport | HOM05D000413 |
| GO:0055085 | ISO | PLAZA Homology (enrichment) | transmembrane transport | HOM05D000413 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005249 | ISO | PLAZA Homology (enrichment) | voltage-gated potassium channel activity | HOM05D000413 |
| GO:0005216 | ISO | PLAZA Homology (enrichment) | ion channel activity | HOM05D000413 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D000413 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |