Gene: Sopen07g004250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g004250
  • Transcript Identifier Sopen07g004250.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 3451011-3454717 : positive

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g004250.1

Descriptions

  • Description 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 1 (4CL1) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G51680
GO:0009698
ISO
PLAZA Integrative Orthologyphenylpropanoid metabolic process AT1G51680
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT1G51680
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT1G51680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016207
ISO
PLAZA Integrative Orthology4-coumarate-CoA ligase activity AT1G51680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G51680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025110 AMP-binding enzyme, C-terminal domain
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
Mapman id Description
7.8.1.1 Coenzyme metabolism.prenylquinone biosynthesis.4-hydroxybenzoate biosynthesis.p-coumarate:CoA ligase (4CL)
9.2.1.3 Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.p-coumarate:CoA ligase (4CL)