Gene: Sopen06g035530

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g035530
  • Transcript Identifier Sopen06g035530.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 60360806-60362786 : negative

Gene Family Information

  • ID HOM05D000953
  • #Genes/#Species 628/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g035530.1

Descriptions

  • Description CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease | BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
ISO
PLAZA Integrative Orthologynegative regulation of chromatin silencing AT3G63270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G63270
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT3G63270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G63270
GO:0035102
ISO
PLAZA Integrative OrthologyPRC1 complex AT3G63270
GO:0035098
ISO
PLAZA Integrative OrthologyESC/E(Z) complex AT3G63270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027806 Harbinger transposase-derived nuclease domain
Mapman id Description
12.3.3.2.1.2.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.chromatin-silencing modulator (ALP1)