Gene: Sopen06g030500
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g030500
- Transcript Identifier Sopen06g030500.1
- Gene Type Coding gene
- Location Spenn-ch06 : 56563909-56565255 : negative
Gene Family Information
- ID HOM05D001053
- #Genes/#Species 576/99
- Phylogenetic origin
- ID ORTHO05D008267
- #Genes/#Species 121/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen06g030500.1
Descriptions
- Description histone deacetylase 8 (HDA08) | CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily | BEST Arabidopsis thaliana protein match is: histone deacetylase 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G08460 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G08460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) |
| 12.3.2.1.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase |