Gene: Sopen06g028240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g028240
  • Transcript Identifier Sopen06g028240.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 54984110-54986819 : negative

Gene Family Information

  • ID HOM05D000749
  • #Genes/#Species 779/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g028240.1

Descriptions

  • Description Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco), Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning. | nucleoside diphosphate kinase 2 (NDPK2) | FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding | INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction | LOCATED IN: in 6 components | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core | BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006165
IEA
InterPronucleoside diphosphate phosphorylation
GO:0006183
IEA
InterProGTP biosynthetic process
GO:0006228
IEA
InterProUTP biosynthetic process
GO:0006241
IEA
InterProCTP biosynthetic process
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT5G63310
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G63310
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT5G63310
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G63310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004550
IEA
InterPronucleoside diphosphate kinase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G63310
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G63310
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G63310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G63310
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G63310
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G63310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036850 Nucleoside diphosphate kinase-like domain superfamily
IPR001564 Nucleoside diphosphate kinase
IPR034907 Nucleoside diphosphate kinase-like domain
Mapman id Description
6.3.2.4 Nucleotide metabolism.deoxynucleotides.salvage pathway.nucleoside diphosphate kinase