Gene: Sopen06g027430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g027430
  • Transcript Identifier Sopen06g027430.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 54325654-54332824 : negative

Gene Family Information

  • ID HOM05D000548
  • #Genes/#Species 997/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g027430.1

Descriptions

  • Description zinc ion binding | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: hypocotyl, root | CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type , Zinc finger, CHY-type , Zinc finger, RING-type , Haemerythrin/HHE cation-binding motif | BEST Arabidopsis thaliana protein match is: zinc ion binding, zinc ion binding
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006879
ISO
PLAZA Integrative Orthologycellular iron ion homeostasis AT1G18910
GO:0043161
ISO
PLAZA Integrative Orthologyproteasome-mediated ubiquitin-dependent protein catabolic process AT1G74770
GO:0098711
ISO
PLAZA Integrative Orthologyiron ion import across plasma membrane AT1G18910
GO:0010039
ISO
PLAZA Integrative Orthologyresponse to iron ion AT1G18910
GO:0033212
ISO
PLAZA Integrative Orthologyiron import into cell AT1G18910
GO:0010106
ISO
PLAZA Integrative Orthologycellular response to iron ion starvation AT1G18910
GO:0034756
ISO
PLAZA Integrative Orthologyregulation of iron ion transport AT1G18910
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G18910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G18910
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G18910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039512 RCHY1, zinc-ribbon
IPR037274 Zinc finger, CHY-type superfamily
IPR008913 Zinc finger, CHY-type
IPR012312 Haemerythrin-like
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR037275 Zinc finger, CTCHY-type superfamily
Mapman id Description
35.1 not assigned.annotated