Gene: Sopen06g024540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g024540
  • Transcript Identifier Sopen06g024540.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 52030682-52037037 : positive

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g024540.1

Descriptions

  • Description DEAD/DEAH box RNA helicase family protein | FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding | INVOLVED IN: response to cadmium ion | LOCATED IN: nucleolus | EXPRESSED IN: guard cell, root, cultured cell | CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
16.10.1.3 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.helicase (UAP56)
16.2.7.1.1 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Sub2)