Gene: Sopen06g024460
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g024460
- Transcript Identifier Sopen06g024460.2
- Gene Type Coding gene
- Location Spenn-ch06 : 51974439-51977310 : positive
Gene Family Information
- ID HOM05D001146
- #Genes/#Species 541/99
- Phylogenetic origin
- ID ORTHO05D000973
- #Genes/#Species 534/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen06g024460.2
Descriptions
- Description Alba DNA/RNA-binding protein | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein , Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related | BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT2G34160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G34160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G34160 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G34160 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G29250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.6.2.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.R-loop reader protein (ALBA1/2) |