Gene: Sopen06g022660
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g022660
- Transcript Identifier Sopen06g022660.1
- Gene Type Coding gene
- Location Spenn-ch06 : 50201746-50205041 : positive
Gene Family Information
- ID HOM05D000109
- #Genes/#Species 3058/96
- Phylogenetic origin
- ID ORTHO05D000210
- #Genes/#Species 1382/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen06g022660.1
Descriptions
- Description member of Putative ligand-gated ion channel subunit family | glutamate receptor 2.8 (GLR2.8) | FUNCTIONS IN: intracellular ligand-gated ion channel activity | INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus | LOCATED IN: endomembrane system, membrane | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 , Ionotropic glutamate receptor , Extracellular ligand-binding receptor , Glutamate receptor-related , Ionotropic glutamate-like receptor, plant | BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015276 | IEA | InterPro | ligand-gated ion channel activity | |
| GO:0008066 | ISO | PLAZA Integrative Orthology | glutamate receptor activity | Solyc06g063210.3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001320 | Ionotropic glutamate receptor |
| IPR028082 | Periplasmic binding protein-like I |
| IPR017103 | Ionotropic glutamate receptor, plant |
| IPR044440 | Plant glutamate receptor, periplasmic ligand-binding domain |
| IPR001828 | Receptor, ligand binding region |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF |
| Mapman id | Description |
|---|---|
| 24.3.9 | Solute transport.channels.ligand-gated cation channel (GLR) |