Gene: Sopen06g022630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g022630
  • Transcript Identifier Sopen06g022630.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 50169124-50172994 : positive

Gene Family Information

  • ID HOM05D000109
  • #Genes/#Species 3058/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g022630.1

Descriptions

  • Description member of Putative ligand-gated ion channel subunit family | glutamate receptor 2.8 (GLR2.8) | FUNCTIONS IN: intracellular ligand-gated ion channel activity | INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus | LOCATED IN: endomembrane system, membrane | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 , Ionotropic glutamate receptor , Extracellular ligand-binding receptor , Glutamate receptor-related , Ionotropic glutamate-like receptor, plant | BEST Arabidopsis thaliana protein match is: glutamate receptor 2.9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006813
ISO
PLAZA Integrative Orthologypotassium ion transport AT3G04110
GO:0006814
ISO
PLAZA Integrative Orthologysodium ion transport AT3G04110
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G04110
GO:0006816
ISO
PLAZA Integrative Orthologycalcium ion transport AT3G04110
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT3G04110
GO:0030003
ISO
PLAZA Integrative Orthologycellular cation homeostasis AT3G04110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015276
IEA
InterProligand-gated ion channel activity
GO:0005262
ISO
PLAZA Integrative Orthologycalcium channel activity AT3G04110
GO:0005272
ISO
PLAZA Integrative Orthologysodium channel activity AT3G04110
GO:0005261
ISO
PLAZA Integrative Orthologycation channel activity AT3G04110
GO:0005267
ISO
PLAZA Integrative Orthologypotassium channel activity AT3G04110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001638 Solute-binding protein family 3/N-terminal domain of MltF
IPR028082 Periplasmic binding protein-like I
IPR001828 Receptor, ligand binding region
IPR044440 Plant glutamate receptor, periplasmic ligand-binding domain
IPR017103 Ionotropic glutamate receptor, plant
IPR001320 Ionotropic glutamate receptor
Mapman id Description
24.3.9 Solute transport.channels.ligand-gated cation channel (GLR)