Gene: Sopen06g022310
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g022310
- Transcript Identifier Sopen06g022310.1
- Gene Type Coding gene
- Location Spenn-ch06 : 49908270-49913344 : negative
Gene Family Information
- ID HOM05D000544
- #Genes/#Species 1005/99
- Phylogenetic origin
- ID ORTHO05D000479
- #Genes/#Species 874/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g022310.1
Descriptions
- Description AL3 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | alfin-like 3 (AL3) | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Protein of unknown function DUF3594 , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: alfin-like 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042393 | IEA | InterPro | histone binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.6.2.2 | Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin) |