Gene: Sopen06g021100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g021100
  • Transcript Identifier Sopen06g021100.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 48796168-48799335 : positive

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g021100.1

Descriptions

  • Description Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. | SU(VAR)3-9 homolog 5 (SUVH5) | FUNCTIONS IN: histone methyltransferase activity | INVOLVED IN: maintenance of DNA methylation, histone methylation, regulation of gene expression, epigenetic, response to chitin, chromatin silencing by small RNA | LOCATED IN: nucleus | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: SET domain , SRA-YDG , Pre-SET zinc-binding sub-group , Pre-SET domain , Post-SET domain | BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
InterProhistone lysine methylation
GO:0016571
ISO
PLAZA Integrative Orthologyhistone methylation AT2G22740
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation AT2G35160
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT2G35160
GO:0040029
ISO
PLAZA Integrative Orthologyregulation of gene expression, epigenetic AT2G35160
GO:0031048
ISO
PLAZA Integrative Orthologyheterochromatin assembly by small RNA AT2G35160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0005515
IEA
InterProprotein binding
GO:0010428
ISO
PLAZA Integrative Orthologymethyl-CpNpG binding AT2G22740
GO:0010429
ISO
PLAZA Integrative Orthologymethyl-CpNpN binding AT2G22740
GO:0042054
ISO
PLAZA Integrative Orthologyhistone methyltransferase activity AT2G35160
GO:0008168
ISO
PLAZA Integrative Orthologymethyltransferase activity AT2G22740
GO:0008327
ISO
PLAZA Integrative Orthologymethyl-CpG binding AT2G22740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007728 Pre-SET domain
IPR036987 SRA-YDG superfamily
IPR015947 PUA-like superfamily
IPR001214 SET domain
IPR003105 SRA-YDG
Mapman id Description
50.2.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group