Gene: Sopen06g017370
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g017370
- Transcript Identifier Sopen06g017370.1
- Gene Type Coding gene
- Location Spenn-ch06 : 44074065-44075939 : positive
Gene Family Information
- ID HOM05D000674
- #Genes/#Species 850/100
- Phylogenetic origin
- ID ORTHO05D001490
- #Genes/#Species 399/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen06g017370.1
Descriptions
- Description Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Ricinus communis (Castor bean), Encodes a temperature sensitive plastidic fatty acid desaturase. | fatty acid desaturase 8 (FAD8) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 , Fatty acid desaturase, type 1 | BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 ., Protein of unknown function DUF3474
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006629 | IEA | InterPro | lipid metabolic process | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G11170 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT5G05580 |
| GO:0006633 | ISO | PLAZA Integrative Orthology | fatty acid biosynthetic process | AT3G11170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016717 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | |
| GO:0042389 | ISO | PLAZA Integrative Orthology | omega-3 fatty acid desaturase activity | AT3G11170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G11170 |
| GO:0042170 | ISO | PLAZA Integrative Orthology | plastid membrane | AT3G11170 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G11170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.1.7.3 | Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-12/delta-15 fatty acid desaturase (FAD2/3/6-8) |