Gene: Sopen06g015450

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g015450
  • Transcript Identifier Sopen06g015450.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 39935042-39937665 : positive

Gene Family Information

  • ID HOM05D001179
  • #Genes/#Species 528/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g015450.1

Descriptions

  • Description Superoxide dismutase (Mn), mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), manganese superoxide dismutase (MSD1) | manganese superoxide dismutase 1 (MSD1) | FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding | INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy | LOCATED IN: mitochondrion | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal , Manganese/iron superoxide dismutase , Manganese/iron superoxide dismutase, C-terminal , Manganese/iron superoxide dismutase, binding site | BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009635
ISO
PLAZA Integrative Orthologyresponse to herbicide Zm00001eb285090
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT3G56350
GO:0019430
ISO
PLAZA Integrative Orthologyremoval of superoxide radicals AT3G10920
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid Zm00001eb285090
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress Zm00001eb285090
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D001179
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G10920
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species Zm00001eb285090
GO:0009410
ISO
PLAZA Integrative Orthologyresponse to xenobiotic stimulus Zm00001eb285090
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress Zm00001eb285090
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G10920
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT3G10920
GO:0006801
IEA
InterProsuperoxide metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030145
ISO
PLAZA Integrative Orthologymanganese ion binding Zm00001eb285090
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D001179
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT3G10920
GO:0004784
IEA
InterProsuperoxide dismutase activity
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion Zm00001eb285090
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D001179

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019831 Manganese/iron superoxide dismutase, N-terminal
IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily
IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily
IPR019832 Manganese/iron superoxide dismutase, C-terminal
IPR001189 Manganese/iron superoxide dismutase
Mapman id Description
10.2.1.2 Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.manganese superoxide dismutase (MSD)