Gene: Sopen06g003000

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g003000
  • Transcript Identifier Sopen06g003000.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 2332706-2340626 : positive

Gene Family Information

  • ID HOM05D000200
  • #Genes/#Species 1958/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g003000.1

Descriptions

  • Description Encodes a member of the type XI myosin protein family involved in root hair elongation. | myosin XI B (XIB) | FUNCTIONS IN: motor activity | INVOLVED IN: root hair elongation, actin filament-based movement | LOCATED IN: myosin complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Dil domain , Dilute , Myosin, N-terminal, SH3-like , Myosin head, motor domain , IQ calmodulin-binding region | BEST Arabidopsis thaliana protein match is: myosin 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
InterProubiquitin protein ligase binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000200
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000200
GO:0003774
ISO
PLAZA Homology (enrichment)motor activity HOM05D000200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016459
ISO
PLAZA Homology (enrichment)myosin complex HOM05D000200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002710 Dilute domain
IPR001373 Cullin, N-terminal
IPR016159 Cullin repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated