Gene: Sopen06g001660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g001660
  • Transcript Identifier Sopen06g001660.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 839947-840867 : positive

Gene Family Information

  • ID HOM05D000196
  • #Genes/#Species 1985/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g001660.1

Descriptions

  • Description Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. | PHYTOCLOCK 1 (PCL1) | CONTAINS InterPro DOMAIN/s: Myb, DNA-binding , Homeodomain-like , Homeodomain-related , Myb-like DNA-binding domain, SHAQKYF class , HTH transcriptional regulator, Myb-type, DNA-binding | BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT5G59570
GO:0000160
ISO
PLAZA Homology (enrichment)phosphorelay signal transduction system HOM05D000196
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G46640
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G46640
GO:0042753
ISO
PLAZA Integrative Orthologypositive regulation of circadian rhythm AT3G46640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G46640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR044841 Transcription factor LUX/BOA-like
IPR006447 Myb domain, plants
IPR009057 Homeobox-like domain superfamily
Mapman id Description
27.1.6.3.1 Multi-process regulation.circadian clock system.evening element regulation.Evening Complex (EC).component LUX