Gene: Sopen05g034620

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g034620
  • Transcript Identifier Sopen05g034620.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 77677610-77683602 : negative

Gene Family Information

  • ID HOM05D001043
  • #Genes/#Species 582/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g034620.1

Descriptions

  • Description Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2 levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. | calreticulin 3 (CRT3) | FUNCTIONS IN: unfolded protein binding, calcium ion binding | INVOLVED IN: in 6 processes | LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P , Calreticulin/calnexin , Calreticulin/calnexin, conserved site , Calreticulin , Concanavalin A-like lectin/glucanase, subgroup , Concanavalin A-like lectin/glucanase | BEST Arabidopsis thaliana protein match is: calreticulin 1a ., Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), Calreticulin/calnexin
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034976
ISO
PLAZA Integrative Orthologyresponse to endoplasmic reticulum stress AT1G09210
GO:0032469
ISO
PLAZA Integrative Orthologyendoplasmic reticulum calcium ion homeostasis Zm00001eb096980
GO:0051208
ISO
PLAZA Integrative Orthologysequestering of calcium ion Zm00001eb096980
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT1G08450
GO:0046283
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound metabolic process AT1G08450
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G09210
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G08450
GO:0009626
ISO
PLAZA Integrative Orthologyplant-type hypersensitive response AT1G08450
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G56340
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction Zm00001eb096980
GO:0055074
ISO
PLAZA Integrative Orthologycalcium ion homeostasis AT1G08450
GO:0006457
IEA
InterProprotein folding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding
GO:0045735
ISO
PLAZA Integrative Orthologynutrient reservoir activity Zm00001eb096980
GO:0051082
IEA
InterProunfolded protein binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G09210
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G09210
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma Zm00001eb096980
GO:0005788
ISO
PLAZA Integrative Orthologyendoplasmic reticulum lumen Os07g0246200
GO:0005789
ISO
PLAZA Integrative Orthologyendoplasmic reticulum membrane AT1G08450
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G56340
GO:0042735
ISO
PLAZA Integrative Orthologyprotein body Zm00001eb096980
GO:0005783
IEA
InterProendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009033 Calreticulin/calnexin, P domain superfamily
IPR001580 Calreticulin/calnexin
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR009169 Calreticulin
Mapman id Description
19.1.1.1.1.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CRT)