Gene: Sopen05g027240
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g027240
- Transcript Identifier Sopen05g027240.1
- Gene Type Coding gene
- Location Spenn-ch05 : 69846627-69848250 : positive
Gene Family Information
- ID HOM05D000039
- #Genes/#Species 4967/96
- Phylogenetic origin
- ID ORTHO05D000366
- #Genes/#Species 1052/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g027240.1
Descriptions
- Description Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. | RARE COLD INDUCIBLE GENE 3 (RCI3) | FUNCTIONS IN: peroxidase activity | INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response | LOCATED IN: endoplasmic reticulum | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Haem peroxidase , Plant peroxidase , Peroxidases heam-ligand binding site , Peroxidase, active site , Haem peroxidase, plant/fungal/bacterial | BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042744 | IEA | InterPro | hydrogen peroxide catabolic process | |
| GO:0006979 | IEA | InterPro | response to oxidative stress |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004601 | IEA | InterPro | peroxidase activity | |
| GO:0020037 | IEA | InterPro | heme binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G21770 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G21770 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G21770 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G21770 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT3G21770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |