Gene: Sopen05g026960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g026960
- Transcript Identifier Sopen05g026960.1
- Gene Type Coding gene
- Location Spenn-ch05 : 69270807-69275647 : positive
Gene Family Information
- ID HOM05D000109
- #Genes/#Species 3058/96
- Phylogenetic origin
- ID ORTHO05D000520
- #Genes/#Species 818/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g026960.1
Descriptions
- Description member of Putative ligand-gated ion channel subunit family | glutamate receptor 3.4 (GLR3.4) | FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity | INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus | LOCATED IN: integral to membrane, membrane | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 , Ionotropic glutamate receptor , Glutamate receptor-related , GPCR, family 3, gamma-aminobutyric acid receptor, type B , Extracellular ligand-binding receptor , Ionotropic glutamate-like receptor, plant | BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015276 | IEA | InterPro | ligand-gated ion channel activity | |
| GO:0008066 | ISO | PLAZA Integrative Orthology | glutamate receptor activity | Solyc05g045650.4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044440 | Plant glutamate receptor, periplasmic ligand-binding domain |
| IPR017103 | Ionotropic glutamate receptor, plant |
| IPR028082 | Periplasmic binding protein-like I |
| IPR001828 | Receptor, ligand binding region |
| IPR001320 | Ionotropic glutamate receptor |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF |
| Mapman id | Description |
|---|---|
| 24.3.9 | Solute transport.channels.ligand-gated cation channel (GLR) |