Gene: Sopen05g023860

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g023860
  • Transcript Identifier Sopen05g023860.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 58113526-58126027 : negative

Gene Family Information

  • ID HOM05D002127
  • #Genes/#Species 314/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g023860.1

Descriptions

  • Description Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco), Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. | HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1) | FUNCTIONS IN: adenosylhomocysteinase activity | INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 34 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase , S-adenosyl-L-homocysteine hydrolase, conserved site , NAD(P)-binding domain , S-adenosyl-L-homocysteine hydrolase, NAD binding | BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G13940
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT4G13940
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT4G13940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G13940
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G13940
GO:0004013
ISO
PLAZA Integrative Orthologyadenosylhomocysteinase activity AT4G13940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G13940
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G13940
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G13940
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G13940
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G13940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000043 Adenosylhomocysteinase-like
IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
IPR036291 NAD(P)-binding domain superfamily
IPR042172 Adenosylhomocysteinase-like superfamily
Mapman id Description
50.3.3 Enzyme classification.EC_3 hydrolases.EC_3.3 hydrolase acting on ether bond