Gene: Sopen05g008130

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g008130
  • Transcript Identifier Sopen05g008130.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 6875460-6884723 : negative

Gene Family Information

  • ID HOM05D000740
  • #Genes/#Species 788/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g008130.1

Descriptions

  • Description HAPLESS 13 (HAP13) | INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport | LOCATED IN: clathrin vesicle coat, clathrin adaptor complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site , Clathrin adaptor, mu subunit, C-terminal , Clathrin adaptor, mu subunit , Longin-like | BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0007034
ISO
PLAZA Integrative Orthologyvacuolar transport AT1G60780
GO:0006892
ISO
PLAZA Integrative Orthologypost-Golgi vesicle-mediated transport AT1G60780
GO:0035653
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle cargo loading, AP-1-mediated AT1G60780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030131
IEA
InterProclathrin adaptor complex
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G60780
GO:0030121
ISO
PLAZA Integrative OrthologyAP-1 adaptor complex AT1G60780
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G60780
GO:0012510
ISO
PLAZA Integrative Orthologytrans-Golgi network transport vesicle membrane AT1G60780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001392 Clathrin adaptor, mu subunit
IPR011012 Longin-like domain superfamily
IPR028565 Mu homology domain
IPR022775 AP complex, mu/sigma subunit
IPR036168 AP-2 complex subunit mu, C-terminal superfamily
Mapman id Description
22.3.1.2.3 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.medium subunit mu (AP1M)